An objective comparison of cell-tracking algorithms

• Authors: ULMAN Vladimír; MAŠKA Martin; MAGNUSSON Klas E G; RONNEBERGER Olaf; HAUBOLD Carsten; HARDER Nathalie; MATULA Pavel; MATULA Petr; SVOBODA David; RADOJEVIC Miroslav; SMAL Ihor; ROHR Karl; JALDÉN Joakim; BLAU Helen M; DZYUBACHYK Oleh; LELIEVELDT Boudewijn; XIAO Pengdong; LI Yuexiang; CHO Siu-Yeung; DUFOUR Alexandre C; OLIVO-MARIN Jean-Christophe; REYES-ALDASORO Constantino C; SOLIS-LEMUS Jose A; BENSCH Robert; BROX Thomas; STEGMAIER Johannes; MIKUT Ralf; WOLF Steffen; HAMPRECHT Fred A; ESTEVES Tiago; QUELHAS Pedro; DEMIREL Ömer; MALMSTRÖM Lars; JUG Florian; TOMANCAK Pavel; MEIJERING Erik; MUNOZ-BARRUTIA Arrate; KOZUBEK Michal; ORTIZ-DE-SOLORZANO Carlos
• Year of publication: 2017
• Type: Article in Periodical
• Magazine / Source: Nature Methods
• MU Faculty or unit: Faculty of Informatics
• web: URL
• Doi: http://dx.doi.org/10.1038/nmeth.4473
• Field: Informatics
• Keywords: Cell migration; Image processing
• Description: We present a combined report on the results of three editions of the Cell Tracking Challenge, an ongoing initiative aimed at promoting the development and objective evaluation of cell tracking algorithms. We analyze the results using performance measures for segmentation and tracking that rank all participating methods. We also analyze the performance of all algorithms in terms of biological measures and their practical usability.

Related projects

• Dynamika a organizace chromosomů během buněčného cyklu a při diferenciaci v normě a patologii
• Benchmarking of algorithms for cell segmentation and tracking