NAChRDB: A Web Resource of Structure–Function Annotations to Unravel the Allostery of Nicotinic Acetylcholine Receptors

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Authors

CHARESHNEU Aliaksei PANT Purbaj RAMOS Ravi José Tristao SEHNAL David GÖKBEL Tugrul IONESCU Crina-Maria KOČA Jaroslav

Year of publication 2021
Type Article in Periodical
Magazine / Source ACS Omega
MU Faculty or unit

Central European Institute of Technology

Citation
Web https://pubs.acs.org/doi/10.1021/acsomega.1c00817
Doi http://dx.doi.org/10.1021/acsomega.1c00817
Keywords Amines; Biological databases; Chemical structure; Sequence alignment; Receptors
Description Nicotinic acetylcholine receptors (nAChRs) comprise a large and ancient family of allosteric ion channels mediating synaptic transmission. The vast knowledge about nAChRs has become difficult to navigate. NAChRDB is a web-accessible resource of curated residue-level functional annotations of neuromuscular nAChRs. Interactive three-dimensional (3D) visualization and sequence alignment give further context to this rich and growing collection of experimental observations and computational predictions. NAChRDB is freely available at https://crocodile.ncbr.muni.cz/Apps/NAChRDB/, with interactive tutorials and regular updates to the content and web interface. No installation or user registration is required. NAChRDB is accessible through any modern internet browser on desktops and mobile devices. By providing immediate and systematic access to practical knowledge gained through decades of research, NAChRDB represents a powerful educational tool and helps guide discovery by revealing gaps in current knowledge and aiding the interpretation of results of molecular and structural biology experiments or computational studies.
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