Project information
Proteins in metabolism and interaction of organisms with the environment
- Project Identification
- MSM0021622413
- Project Period
- 1/2005 - 12/2011
- Investor / Pogramme / Project type
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Ministry of Education, Youth and Sports of the CR
- Research Intents
- MU Faculty or unit
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Faculty of Science
- prof. RNDr. Jaroslav Koča, DrSc.
- Other MU Faculty/Unit
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Central European Institute of Technology
- Keywords
- proteins, structure function relationships, protein complexes, proteome, metabolome
The proposal is the follow up of the previous, in our view successful, long-term research plan "Structure-Function Relationships of Biomolecules and their Role in Metabolism" studied in 1998-2004, and partly the project "Laboratory of Structure and Dynamics of Biomolecules" in the framework of program "250" studied in 1996-2000. The results of these projects were published in tens of scientific articles communicated in renowned international journals with high impact factors. The key aim was identification and characterization of low molecular weight substances involved in metabolism of bacteria and fungi with the special attention devoted to biochemical activities and the structure.
This new proposal will deal with other proteins from various organisms, for example animal proteins binding pheromones or proteins interacting with sacharides. The function and regulation of enzymes will be studied by novel methods suitable for monitoring of in vivo activity via monitoring of intracellular metabolites. We will continue to use structural methods. Keywords of the long-term research plan are protein, its function, structure, structure-function relationships and complexes of proteins. More general keywords are proteome and metabolome. The project will focus on such hot topics of current life sciences like protein/DNA interactions, synthesis of proteins on ribosome or applications of photo-labile groups for directed geometrical changes of protein-substrate complexes and regulation of enzymatic reactions.
Publications
Total number of publications: 836
2011
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Natural Compound Cudraflavone B Shows Promising Anti-inflammatory Properties in Vitro
Journal of Natural Products, year: 2011, volume: 74, edition: 4, DOI
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New pH dependent lectin from bioluminescent bacterium Photorhabdus luminescens
Year: 2011, type: Conference abstract
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Nitrate reductase whole-cell assay: side effects associated with the use of benzyl viologen
Folia Microbiologica, year: 2011, volume: 56, edition: 1, DOI
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NMR cross-correlated relaxation rates reveal ion coordination sites in DNA
Journal of the American Chemical Society, year: 2011, volume: 133, edition: 35, DOI
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NMR study of an RNA polymerase subunit unique for gram-positive bacteria
Year: 2011, type: Appeared in Conference without Proceedings
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Non-Invasive Assessment of Embryo Viability In Assisted Reproduction using Capillary Electrophoresis
Year: 2011, type: Conference abstract
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Nové poznatky o bambus[6]urilu
Year: 2011, type: Conference abstract
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Novel Adamantane-Bearing Anilines and Properties of Their Supramolecular Complexes with beta-Cyclodextrin
Supramolecular Chemistry, year: 2011, volume: 23, edition: 10, DOI
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Nový lektin ze světélkující bakterie Photorhabdus luminescens
Year: 2011, type: Conference abstract
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On-line Inhibition Study of Cytochrome P450 2C9 Isoform Reaction with Diclofenac
Book of Abstracts 8th International Interdisciplinary Meeting on Bioanalysis CECE 2011, year: 2011